Datashare
LucidChart
Snakemake
Zenodo
Conda Mamba
- Using the shared CCBR mamba installation on Biowulf
- Move from Conda to Mamba
Containers
- Build docker containers interactively with Google Cloud Shell
- How to use containers with singularity on biowulf
GitHub
- GitHub Actions demo
- Guide
HPCDME
Code Club
- 2025 02 11 Journal Club
  - Improving bioinformatics software quality through teamwork
- 2025 08 26 Establishing Code Club
  - Establishing a Community of Practice
R Package
- Create from Conda
UCSC

Snakemake

Author

Step-by-step guide for setting up and learning to use Snakemake, with examples and use cases