multiOmicDataSet class

Usage

multiOmicDataSet(sample_metadata, anno_dat, counts_lst, analyses_lst = list())

sample_metadata: sample metadata as a data frame or tibble. The first column is assumed to contain the sample IDs which must correspond to column names in the raw counts.
anno_dat: data frame of feature annotations, such as gene symbols or any other information about the features in counts_lst.
counts_lst: named list of data frames containing counts, e.g. expected feature counts from RSEM. Each data frame is expected to contain a feature_id column as the first column, and all remaining columns are sample IDs in the sample_meta.
analyses_lst: named list of analysis results, e.g. DESeq results object