GSEA.deg2gs

GSEA.deg2gs

Reads a rnaseq pipeliner *_DEG_all_genes.txt file and outputs a prioritized list of Ensembl gene IDs for ToppFun

Author: Susan Huse

NIAID Center for Biological Research

Frederick National Laboratory for Cancer Research

Leidos Biomedical

• v 1.0 - initial code version.
• v 1.1 - updated for new column headers in pipeliner limma_DEG_all_genes.txt
• v 1.2 - top2Excel format is now csv rather than tab-delimited