Plot 2D or 3D PCA for counts dataframe

Plot 2D or 3D PCA for counts dataframe

Arguments

moo_counts

counts dataframe

sample_metadata

Required if moo_counts is a data.frame: sample metadata as a data frame or tibble.

principal_components

vector with numbered principal components to plot. Use 2 for a 2D pca with ggplot, or 3 for a 3D pca with plotly. (Default: c(1,2))

...

additional arguments forwarded to plot_pca_2d() (if 2 PCs) or plot_pca_3d() (if 3 PCs).

See also

plot_pca generic

Other plotters for counts dataframes: plot_corr_heatmap_dat, plot_expr_heatmap_dat, plot_histogram_dat, plot_read_depth_dat