cat_cat

A module for concatenation of gzipped or uncompressed files. Adapted from the nf-core cat module https://github.com/nf-core/modules/tree/9326d73af3fbe2ee90d9ce0a737461a727c5118e/modules/nf-core/cat

nf-core modules \
  --git-remote https://github.com/CCBR/nf-modules \
  install cat/cat

https://github.com/CCBR/nf-modules/…/modules/CCBR/cat/cat/

Input

name	type	description	pattern
meta	map	Groovy Map containing sample information
e.g. [ id:‘test’, single_end:false ]	NA
files_in	file	List of compressed / uncompressed files	*

Output

name	type	description	pattern
versions	file	File containing software versions	versions.yml
file_out	file	Concatenated file. Will be gzipped if file_out ends with “.gz”	${file_out}

Tools

cat

  Docs     GPL-3.0-or-later

Just concatenation