Wrapper for DoubletFinder and scDblFinder for identifying doublets
Usage
filter_doublets(so_in, doublet_finder_method = "DoubletFinder")
Arguments
- so_in
A provided Seurat scRNA object
- doublet_finder_method
Character string indicating the use of
"DoubletFinder" (default), "scDblFinder", "consensus" removal of doublets,
or the "union" of total doublets identified in both algorithms
Value
A subsetted Seurat object with doublets removed
Details
Runs the latest version of DoubletFinder and/or scDblFinder and returns
a filtered scRNA object with doublets removed