CARLISLE¶

Cut And Run anaLysIS pipeLinE

This snakemake pipeline is built to run on Biowulf.

For comments/suggestions/advice please contact CCBR_Pipeliner@mail.nih.gov.

For detailed documentation on running the pipeline, please view the website: https://CCBR.github.io/CARLISLE/

Workflow¶

The CARLISLE pipeline was developed in support of NIH Dr Vassiliki Saloura's Laboratory and Dr Javed Khan's Laboratory. It has been developed and tested solely on NIH HPC Biowulf.